CDS

Accession Number TCMCG051C09091
gbkey CDS
Protein Id XP_024450808.1
Location complement(join(22872395..22872454,22872710..22872872,22873205..22873392,22873920..22873965,22874775..22874822,22875327..22875429,22875521..22875734,22876649..22876768,22877679..22877827,22879311..22879466,22879853..22879868))
Gene LOC7462440
GeneID 7462440
Organism Populus trichocarpa

Protein

Length 420aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024595040.1
Definition 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category Q
Description Phytoene dehydrogenase, chloroplastic
KEGG_TC -
KEGG_Module M00097        [VIEW IN KEGG]
KEGG_Reaction R04786        [VIEW IN KEGG]
R04787        [VIEW IN KEGG]
R07510        [VIEW IN KEGG]
R09652        [VIEW IN KEGG]
R09653        [VIEW IN KEGG]
R09654        [VIEW IN KEGG]
KEGG_rclass RC01214        [VIEW IN KEGG]
RC01958        [VIEW IN KEGG]
RC03092        [VIEW IN KEGG]
RC03093        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K02293        [VIEW IN KEGG]
EC 1.3.5.5        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016108        [VIEW IN EMBL-EBI]
GO:0016109        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016116        [VIEW IN EMBL-EBI]
GO:0016117        [VIEW IN EMBL-EBI]
GO:0016166        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046148        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGATGGAGATTGTTGGGGCGTATCCAAATGTGCAGAACCTTTTTGGTGAACTTGGTATCAATGACAGGTTGCAGTGGAAGGAGCATTCTATGATATTTGCAATGCCAAATAAGCTAGGAGAATTCAGTCGATTTGATTTTCCTGAAGTTCTCCCTGCACCATTAAATGGGATATTGGCCATTTTGAAGAACAATGAAATGCTGACTTGGCCAGAGAAAGTGAAGTTTGCAATTGGGCTCCTGCCTGTAATGGTTGGTGGACAGGCATATGTTGAGGCTCAAGATGGTTTGAGTGCTCAAGAGTGGATGAGAAAGCAGGGTGTGCCTGATAGAGTGACTACTGAGGTGTTTATTGCCATGTCGAAGGCTCTTAACTTTATTAACCCAGATGAACTTTCAATGCAATGCATTTTGATAGCTTTGAACCGATTTTTTCAGGAGAAACATGGTTCAAAGATGGCTTTCTTGGATGGTAATCCCCCGGAGAGACTCTGCATGCCAATCGTCGATCATATTCAGTCGCTTGGTGGTGAAGTCAAACTCAATTCACGGATAAAGAAAATTGAGCTAAATGATGATGGAACAGTGAAGAGATTTTTAGTAAATTCTGGGGACGTGATTGAAGGGGATGTTTATGTGTTTGCGACTCCAGTTGATATTTTAAAGCTTCTTTTGCCTGATAACTGGAAGGAGATTCCTTACTTCAAGAAATTGAAGAAATTAGTTGGAGTTCCTGTTATCAACGTTCACATATGGTTTGACAGGAAATTGAAGAATACATATGATCACCTACTTTTTAGCAGAAGTCCCCTTCTCAGTGTGTATGCTGACATGTCTGTGACATGCAAGGAATATTATGACCCAAAGCAGTCAATGCTGGAGTTAGTTTTTGCGCCTGCTGAAGAATGGATTTCACGGAGTGACTCGGAGATCATTGATGCTACAATGGGGGAACTTGCAAAACTTTTTCCTGATGAAATATCCACAGATCAGAGCAAAGCAAAAATAGTGAAGTATCATGTTGTTAAAACTCCAAGGTCTGTTTACAAGACAGTCCCAAACTGTGAACCTTGCCGTCCCTCACAAAGATCTCCTATAGAGGGTTTCTATCTATCTGGTGACTACACGAAACAAAAGTACCTGGCTTCAATGGAAGGTGCTGTTCTATCAGGGAAGCTTTGTGCGCAGGCAATTGTACAGGATTATGAGTTGCTTGTTGCTCGGGGGCAAAGAGAGTTGACTGAGGCCACCATGAGTTAA
Protein:  
MTMEIVGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKLGEFSRFDFPEVLPAPLNGILAILKNNEMLTWPEKVKFAIGLLPVMVGGQAYVEAQDGLSAQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFFQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVKLNSRIKKIELNDDGTVKRFLVNSGDVIEGDVYVFATPVDILKLLLPDNWKEIPYFKKLKKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYDPKQSMLELVFAPAEEWISRSDSEIIDATMGELAKLFPDEISTDQSKAKIVKYHVVKTPRSVYKTVPNCEPCRPSQRSPIEGFYLSGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLVARGQRELTEATMS